Datasets
- Johns Hopkins Precision Medicine Analytics Platform (PMAP) Compilation of clinical datasets and analytical tools for use within Johns Hopkins
- PMAP Cookbook Tutorials for analyzing data taken from PMAP
- PMAP Data Catalog Catalog of datasets available in PMAP
- SAFE Desktop Virtual machine for accessing datasets and analytical tools in PMAP
- Crunchr Collaborative data science platform for working with data in PMAP
- Johns Hopkins Welch Medical Library Datasets Health statistics databases and tools for secondary analysis
- Johns Hopkins Bloomberg School of Public Health Datasets Public health data resources and tools for secondary analysis
- Johns Hopkins Libraries Databases Databases with health, economics, and crime data (and more) from national, state, and local levels for secondary analysis
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Please note: At this time, only JH staff are able to submit the SAFE Desktop request form. Students can gain access to SAFE Desktop, but staff members must request it on behalf of the student. If you would like to request access, please submit a ticket via our discord server.
Systematic Review
- REDCap Web application for building and managing databases
- Covidence Software for systematic reviews
- DistillerSR Software for literature reviews
- PRISMA Statement Reporting guidelines for systemic reviews
Hopkins Resources
- Johns Hopkins Synergy Compilation of Johns Hopkins research resources
- Advanced Research Computing at Hopkins (ARCH) Shared computing facility
- Johns Hopkins Biostatistics Center Biostatistics and data management services
- Joint High Performance Computing Exchange Fee-for-service computing core
- Technology Information Center Support for research regarding digital health solutions
- Azure Public cloud platform
Courses
- Johns Hopkins Biomedical Informatics & Data Science Free, quarter-long courses with online options, can email course directors requesting to audit
- Welch Library Free courses on working with data
Faculty Search
- Pure Database linking faculty with keywords and research topics
- inHealth Precision Medicine Symposium 2023 Presentation recordings, digital posters, and speaker bios
Working Groups and Support
- inHealth Researcher Workshop Monthly meetings as well as recording about work in inHealth.
- DSAI Hub for Communication and Collaboration Slack workspace for Data Science and AI Institute
- DTRD Subcouncil Teams channel with archived presentations and upcoming meetings for the data trust research subcouncil.
OHDSI Community Calls
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OHDSI hosts weekly virtual meetings from 3-3:30PM EST every Monday! Join to learn more about the platform and recent updates.
JOIN
PMAP Data Scientist Hub for Communication and Collaboration
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Join the teams channel for data scientists working with PMAP
JOIN